DGtal 1.4.0
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VoxelComplexFunctions.h
1
17#pragma once
18
32#if defined(VoxelComplexFunctions_RECURSES)
33#error Recursive header files inclusion detected in VoxelComplexFunctions.h
34#else // defined(VoxelComplexFunctions_RECURSES)
36#define VoxelComplexFunctions_RECURSES
37
38#if !defined VoxelComplexFunctions_h
40#define VoxelComplexFunctions_h
41
43// Inclusions
44#include <iostream>
45#include "DGtal/base/Common.h"
46#include "DGtal/topology/VoxelComplex.h"
48namespace DGtal
49{
50 namespace functions {
51
52 template < typename TComplex >
53 TComplex
55 TComplex & vc ,
56 std::function<
57 std::pair<typename TComplex::Cell, typename TComplex::Data> (
58 const typename TComplex::Clique &)
59 > Select ,
60 std::function<
61 bool(
62 const TComplex & ,
63 const typename TComplex::Cell & )
64 > Skel,
65 bool verbose = false
66 );
67
68 template < typename TComplex >
69 TComplex
71 TComplex & vc ,
72 std::function<
73 std::pair<typename TComplex::Cell, typename TComplex::Data> (
74 const typename TComplex::Clique &)
75 > Select ,
76 std::function<
77 bool(
78 const TComplex & ,
79 const typename TComplex::Cell & )
80 > Skel,
81 uint32_t persistence,
82 bool verbose = false
83 );
85// Select Functions
94 template < typename TComplex >
95 std::pair<typename TComplex::Cell, typename TComplex::Data>
97 const typename TComplex::Clique & clique);
98
107 template < typename TComplex >
108 std::pair<typename TComplex::Cell, typename TComplex::Data>
110 const typename TComplex::Clique & clique);
111
122 template < typename TComplex, typename TRandomGenerator >
123 std::pair<typename TComplex::Cell, typename TComplex::Data>
125 const typename TComplex::Clique & clique,
126 TRandomGenerator & gen);
127
153 template < typename TDistanceTransform, typename TComplex >
154 std::pair<typename TComplex::Cell, typename TComplex::Data>
156 const TDistanceTransform & dist_map,
157 const typename TComplex::Clique & clique);
159// Skeleton Functions
176 template < typename TComplex >
177 bool
179 const TComplex & vc,
180 const typename TComplex::Cell & cell);
181
191 template < typename TComplex >
192 bool
194 const TComplex & vc,
195 const typename TComplex::Cell & cell);
196
210 template < typename TComplex >
211 bool
213 const TComplex & vc,
214 const typename TComplex::Cell & cell);
215
228 template < typename TComplex >
229 bool
231 const TComplex & vc,
232 const typename TComplex::Cell & cell);
233
249 template < typename TComplex >
250 bool
252 const TComplex & vc,
253 const typename TComplex::Cell & cell);
254
269 template < typename TComplex >
270 bool
272 const TComplex & vc,
273 const typename TComplex::Cell & cell);
274
313 template < typename TComplex >
314 bool
316 const boost::dynamic_bitset<> & table,
317 const std::unordered_map<typename TComplex::Point, unsigned int> & pointToMaskMap,
318 const TComplex & vc,
319 const typename TComplex::Cell & cell);
321// Helpers for Objects
332 template < typename TObject >
333 bool
334 isZeroSurface(const TObject & small_obj) ;
335
349 template < typename TObject >
350 bool
351 isOneSurface(const TObject & small_obj) ;
352
365 template <typename TObject >
366 std::vector< TObject >
367 connectedComponents(const TObject & input_obj, bool verbose);
368 } // namespace functions
369
371 //Operators between VoxelComplexes//
372
384 template <typename TKSpace, typename TCellContainer>
388 {
390 for ( Dimension i = 0; i <= VC::dimension; ++i )
391 functions::setops::operator-=( S1.myCells[ i ],S2.myCells[ i ] );
392 return S1;
393 }
394
406 template <typename TKSpace, typename TCellContainer>
407 inline VoxelComplex< TKSpace, TCellContainer >
410 {
412 VC S(S1);
413 for ( Dimension i = 0; i <= VC::dimension; ++i )
414 functions::setops::operator-=( S.myCells[ i ],S2.myCells[ i ] );
415 return S;
416 }
417} // namespace DGtal
418
419
421// Includes inline functions.
422#include "DGtal/topology/VoxelComplexFunctions.ih"
423
424// //
426
427#endif // !defined VoxelComplexFunctions_h
428
429#undef VoxelComplexFunctions_RECURSES
430#endif // else defined(VoxelComplexFunctions_RECURSES)
std::vector< CellMap > myCells
This class represents a voxel complex living in some Khalimsky space. Voxel complexes are derived fro...
bool skelIsthmus(const TComplex &vc, const typename TComplex::Cell &cell)
bool skelWithTable(const boost::dynamic_bitset<> &table, const std::unordered_map< typename TComplex::Point, unsigned int > &pointToMaskMap, const TComplex &vc, const typename TComplex::Cell &cell)
std::pair< typename TComplex::Cell, typename TComplex::Data > selectRandom(const typename TComplex::Clique &clique)
std::pair< typename TComplex::Cell, typename TComplex::Data > selectFirst(const typename TComplex::Clique &clique)
TComplex persistenceAsymetricThinningScheme(TComplex &vc, std::function< std::pair< typename TComplex::Cell, typename TComplex::Data >(const typename TComplex::Clique &) > Select, std::function< bool(const TComplex &, const typename TComplex::Cell &) > Skel, uint32_t persistence, bool verbose=false)
bool isZeroSurface(const TObject &small_obj)
bool skelSimple(const TComplex &vc, const typename TComplex::Cell &cell)
bool isOneSurface(const TObject &small_obj)
bool skelEnd(const TComplex &vc, const typename TComplex::Cell &cell)
TComplex asymetricThinningScheme(TComplex &vc, std::function< std::pair< typename TComplex::Cell, typename TComplex::Data >(const typename TComplex::Clique &) > Select, std::function< bool(const TComplex &, const typename TComplex::Cell &) > Skel, bool verbose=false)
std::pair< typename TComplex::Cell, typename TComplex::Data > selectMaxValue(const TDistanceTransform &dist_map, const typename TComplex::Clique &clique)
std::vector< TObject > connectedComponents(const TObject &input_obj, bool verbose)
bool skelUltimate(const TComplex &vc, const typename TComplex::Cell &cell)
bool twoIsthmus(const TComplex &vc, const typename TComplex::Cell &cell)
bool oneIsthmus(const TComplex &vc, const typename TComplex::Cell &cell)
DGtal is the top-level namespace which contains all DGtal functions and types.
boost::uint32_t uint32_t
unsigned 32-bit integer.
Definition BasicTypes.h:63
DGtal::uint32_t Dimension
Definition Common.h:136
KForm< Calculus, order, duality > operator-(const KForm< Calculus, order, duality > &form_a, const KForm< Calculus, order, duality > &form_b)
CubicalComplex< TKSpace, TCellContainer > & operator-=(CubicalComplex< TKSpace, TCellContainer > &, const CubicalComplex< TKSpace, TCellContainer > &)