DGtal 1.3.0
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DicomReader.h
1
17#pragma once
18
31#if defined(DicomReader_RECURSES)
32#error Recursive header files inclusion detected in DicomReader.h
33#else
35#define DicomReader_RECURSES
36
37#if !defined DicomReader_h
39#define DicomReader_h
40
42// Inclusions
43#include <iostream>
44#include "DGtal/base/Common.h"
45#include "DGtal/base/CUnaryFunctor.h"
46#include "DGtal/images/CImage.h"
47#include "DGtal/images/ImageContainerByITKImage.h"
48
50
51#ifdef _MSC_VER
52#pragma warning(disable : 4290)
53#endif
54
55namespace DGtal
56{
57
59// class DicomReader
89 template <typename TImageContainer,
90 typename TFunctor = functors::Cast< typename TImageContainer::Value > >
92 {
93 // ----------------------- Standard services ------------------------------
94 public:
95
97 typedef typename TImageContainer::Value Value;
98 typedef TFunctor Functor;
100
103 BOOST_STATIC_ASSERT(( TImageContainer::Domain::dimension == 3 ));
104
116 static ImageContainer importDicom( const std::string & aFilename,
117 const Functor & aFunctor = Functor());
118
130 static ImageContainer importDicomSeries( const std::vector<std::string> & filenames,
131 const Functor & aFunctor = Functor());
132
133 private:
134
135 template <typename Domain, typename PixelType>
137 importDicomFiles_( const std::vector<std::string> & filenames );
138
139
140 template <typename Image, typename Domain, typename OutPixelType,
141 typename PixelType>
142 struct Aux
143 {
144 static inline Image
145 importDicomFiles( const std::vector<std::string> & filenames,
146 const TFunctor & aFunctor );
147 };
148
149 //specialization
150 template <typename Domain, typename OutPixelType, typename PixelType>
152 OutPixelType, PixelType>
153 {
155 importDicomFiles( const std::vector<std::string> & filenames,
156 const TFunctor & aFunctor );
157 };
158
159
160 template <typename PixelType>
161 static inline TImageContainer
162 importDicomFiles(const std::vector<std::string> & filenames,
163 const TFunctor & aFunctor);
164
165
166 }; // end of class DicomReader
167
168
169
170} // namespace DGtal
171
172
174// Includes inline functions.
175#include "DGtal/io/readers/DicomReader.ih"
176
177
178// //
180
181#endif // !defined DicomReader_h
182
183#undef DicomReader_RECURSES
184#endif // else defined(DicomReader_RECURSES)
Aim: implements a model of CImageContainer using a ITK Image.
Aim: implements association bewteen points lying in a digital domain and values.
Definition: Image.h:70
DGtal is the top-level namespace which contains all DGtal functions and types.
boost::int32_t int32_t
signed 32-bit integer.
Definition: BasicTypes.h:72
static ImageContainerByITKImage< Domain, OutPixelType > importDicomFiles(const std::vector< std::string > &filenames, const TFunctor &aFunctor)
static Image importDicomFiles(const std::vector< std::string > &filenames, const TFunctor &aFunctor)
Aim: Import a 3D DICOM image from file series.
Definition: DicomReader.h:92
BOOST_CONCEPT_ASSERT((concepts::CImage< ImageContainer >))
BOOST_STATIC_ASSERT((TImageContainer::Domain::dimension==3))
TImageContainer::Value Value
Definition: DicomReader.h:97
TImageContainer ImageContainer
Definition: DicomReader.h:96
static ImageContainer importDicomSeries(const std::vector< std::string > &filenames, const Functor &aFunctor=Functor())
static ImageContainerByITKImage< Domain, PixelType > importDicomFiles_(const std::vector< std::string > &filenames)
static TImageContainer importDicomFiles(const std::vector< std::string > &filenames, const TFunctor &aFunctor)
static ImageContainer importDicom(const std::string &aFilename, const Functor &aFunctor=Functor())
BOOST_CONCEPT_ASSERT((concepts::CUnaryFunctor< Functor, PixelType, Value >))
Aim: Defines the concept describing a read/write image, having an output iterator.
Definition: CImage.h:103
Aim: Defines a unary functor, which associates arguments to results.
Definition: CUnaryFunctor.h:90
HyperRectDomain< Space > Domain
ImageContainerBySTLVector< HyperRectDomain< Z2i::Space >, std::unordered_set< Z2i::Point > > TImageContainer